Repbase Reports |
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| 2003, Volume 3, Issue 12 |
| December 31, 2003 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 212 |
Mariner-4_AN |
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DNA transposon. Mariner superfamily. Tc1 clade. |
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Submitted: 31-Dec-2003 |
Accepted: 31-Dec-2003 |
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Key Words: DNA transposon; transposase; Mariner superfamily; Tc1 clade; Mariner-4_AN |
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Source: consensus |
Organism: Emericella nidulans (Aspergillus nidulans) |
Taxonomy: cellular organisms; Eukaryota; Fungi/Metazoa group; Fungi; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiales; Trichocomaceae; Emericella |
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| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: Mariner-4_AN, a family of nonautonomous DNA transposons in the Aspergillus nidulans genome. |
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Journal: Repbase Reports 3:(12) p. 212 (2003) |
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Abstract: DNA transposon. Mariner superfamily. Tc1 clade. The consensus sequence was built based on multiple alignment of several copies 99% identical the consensus. Mariner-4_AN elements are characterized by TA target site duplications and 36-bp TIRs. It encodes a 449-aa Mariner-4_ANp transposase (2 exons, pos. 277-1149, 1205-1681). This family is closely related to Mariner-4_AN. The consensus sequences are 68% identical to each other. Mariner-4_ANp: MPAPHPNELRVQVLSYWALGIQPPDIAKMLQINVRTIRDMIQKGQDRGYNPAQCMRVKLE YVEDGKRSGRPKEISEATDMAVLASVKQDRNGREKSSEILAFEAGISHSSVLQILHKHGF TIVKPSWKPGLTEAAKATRLRFCLDHQHWTLEDWKAVIFTDETSVILGHRRGSVRVWRTA RDVHDPTCIRRRWKGSSDFLVWGCFTYDKKGPLHIFEPETAYQHKKSEVEIAALNAELEP ILREEWEIETRLKRLHLRGVPGRVPTWRFTEKTGKLVRKSKGGVDWWRYQQEILLPHLIP FAKACKIERPDTKVLEDGAPAHKHHAQRRIYSIHEIEKIFDWPGNSPDLNAIEPCWMWMK KRTTSRGAPRDKKTGKTAWIKAWNELPQEKIQGWIERLIRHIQEVIQHDGGNEYKEGRTD HDARSWKGRRIKGQLSARQDLSPDPWEDL
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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