Repbase Reports |
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| 2003, Volume 3, Issue 12 |
| December 31, 2003 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 211 |
Mariner-3a_AN |
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Mariner-3a_AN is a subfamily of Mariner-3_AN - a consensus sequence. |
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Submitted: 31-Dec-2003 |
Accepted: 31-Dec-2003 |
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Key Words: DNA transposon; transposase; Mariner superfamily; Pogo clade; Mariner-3_AN; Mariner-3a_AN |
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Source: consensus |
Organism: Emericella nidulans (Aspergillus nidulans) |
Taxonomy: cellular organisms; Eukaryota; Fungi/Metazoa group; Fungi; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiales; Trichocomaceae; Emericella |
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| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: Mariner-3_AN, a family of nonautonomous DNA transposons in the Aspergillus nidulans genome. |
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Journal: Repbase Reports 3:(12) p. 211 (2003) |
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Abstract: It is a subfamily of Mariner-3_AN. This subfamily is characterized by the TA TSDs and 15-bp TIRs. The 524-aa Mariner-3a_AN transposase is encoded by a single ORF (pos. 194-1765). The Mariner-3a_AN and Mariner-3_AN consensus sequences are 89% identical to each other. The Mariner-3a_AN consensus sequence was reconstructed based on multiple alignment of 3 copies ~1% divergent from the consensus. Mariner-3a_ANp: MAPPKRLSDVQRKALRDWVHSQSRRPTQKACIAWFQAHYNHRLSQSTVSDILSPQYHYLDSECNPSSATR KGIGQWQDLEAILYEWHHTLDCKGAYISGDILIEKARQIWSSLSQYRDQPPPAFSSGWLHRFKQRYNIKQ RTYHGEAGSVPEDVEEEMKAIRTIAGQYNEDDIYNMDETGLFWRMPPSQSLSSVNRPGIRKDKTRISMIC CVNASGTDRLPIWVIGKAHKPRALRNINISAIGIRWQWNKNAWMNQIIMREWLLEFYQHIGQRSILLTMD NLPAHLSGLELAPPPPNIRICWLPKNSTSRYQPLDQGIIQNLKIYYRKQWLRYMLSHYERDLDPLESVTI LDCIRWLVRSWHHDVLSSTILACFYKSTLVPDPIQLPVEAPDLKPLYEKVQQSGNLSDCMDISFFLNPAE ESQEPTSSSNGMSSEVLLEQLITEASGSTDIYSDDLDDDTAEPAPLPKPQDALDAVRLLISYMEGQDASK APILRSLERLERDLEGEIITARAQGTLDSWLSNA
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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