Repbase Reports |
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| 2002, Volume 2, Issue 5 |
| May 31, 2002 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 20 |
HARBINGERN3_DR |
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HARBINGERN3_DR is a nonautonomous DNA transposon - a consensus. |
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Submitted: 31-May-2002 |
Accepted: 31-May-2002 |
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Key Words: Nonautonomous DNA transposon; Harbinger/PIF superfamily; 3-bp TSD; 16-bp TIRs; HARBINGERN3_DR |
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Source: consensus |
Organism: Danio rerio |
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Ostariophysi; Cypriniformes; Cyprinoidea; Cyprinidae; Rasborinae; Danio |
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| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: HARBINGERN3_DR, a nonautonomous DNA transposon from Danio rerio. |
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Journal: Repbase Reports 2:(5) p. 20 (2002) |
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Abstract: HARBINGERN3_DR is an ancient nonautonomous DNA transposon. Putatively, it belongs to the Harbinger/PIF superfamily. HARBINGERN3_DR copies are flanked by 3-bp target site duplications. The consensus sequence has perfect 21-bp terminal inverted repeats. There are approximately 1000 copies of HARBINGERN3_DR in the zebrafish genome; they are ~91% identical with the consensus sequence. This family is composed of minor subfamilies.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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