Repbase Reports |
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| 2002, Volume 2, Issue 11 |
| November 30, 2002 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 16 |
INVADER6_I |
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INVADER6_I is an internal portion of the INVADER6 endogenous retrovirus. |
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Submitted: 00- - 0 |
Accepted: 30-Nov-2002 |
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Key Words: endogenous retrovirus; LTR retrotransposon; gag; pol; GYPSY superfamily; INVADER group; INVADER6_LTR; INVADER6_I |
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Source: Drosophila melanogaster |
Organism: Drosophila melanogaster |
Taxonomy: Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila |
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Authors: Kapitonov,V.V. and Jurka,J. |
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Title: INVADER6, a family of Gypsy-like endogenous retroviruses in drosophila. |
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Journal: Repbase Reports 2:(11) p.16 (2002) |
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Abstract: INVADER6 is a family of Gypsy-like endogenous retroviruses and it belongs to the INVADER group. INVADER6 is less than 70% identical to other Gypsy-like elements present in the sequenced portion of the D. melanogaster genome. INVADER6_I is an internal portion of the INVADER6 endogenous retrovirus. Its long terminal repeat is listed in Repbase as INVADER6_LTR. INVADER6_I is flanked by 6% divergent LTRs. Therefore, INVADER6 is expected to be younger than 1 Myr. The internal sequence in incomplete. Presumably, an active INVADER6_I encoded a long polyprotein composed of gag, protease, integrase and reverse transcriptase domains. The corresponding ORF present in the genomic copy of INVADER6_I is slightly damaged by deletions and stop codons.
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Derived: Positions 1484074 1488172 Accession No NT_033778 GenBank |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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