Repbase Reports |
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| 2001, Volume 1, Issue 3 |
| March 31, 2001 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 30 |
ATGP10_I |
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Internal portion of the ATGP10 gypsy-like retrovirus - a fossil. |
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Submitted: 31-Mar-2001 |
Accepted: 31-Mar-2001 |
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Key Words: LTR retrotransposon; retrovirus; gypsy superfamily; ATGP10 family; gag; reverse transcriptase; ATGP10LTR; ATGP10_I |
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Source: thale cress |
Organism: Arabidopsis thaliana |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; Rosidae; Capparales; Brassicaceae; Arabidopsis |
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| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: ATGP10_I, an internal portion of the ATGP10 gypsy-like retrovirus. |
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Journal: Repbase Reports 1:(3) p. 30 (2001) |
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Abstract: ATGP10_I is an internal portion of ATGP10, a gypsy-like retrovirus which was integrated into the genome long time ago; its LTRs (deposited in Repbase as ATGP10LTR) are 90% identical to each other. Two ORFs, which have encoded GAG and POL polyproteins, are saturated by false stop codons and frame shifts.
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Derived: Positions 59417 65633 Accession No AC022456 GenBank (rel. 124.0) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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